Bjarne Knudsen
As the chief scientific officer at CLC bio Bjarne is responsible for developing new bioinformatics software and hardware.
- Worked as a post doctoral fellow with Michael M. Miyamoto at the University of Florida.
- PhD thesis regarding bioinformatics algorithms at University of Aarhus, under supervision of Jotun Hein.
- A former gold medalist in the International Chemistry Olympiads as well as bronze medalist in the International Mathematical Olympiads
Scientific articles
Among other has published following articles:- Knudsen B, Hein J. (1999)
RNA secondary structure prediction using stochastic context-free grammars and evolutionary history. Bioinformatics, 15(6):446-54 - Knudsen B, Hein J. (2003)
RNA secondary structure prediction using stochastic context-free grammars. Nucleic Acids Research, 31(13):3423-8 - Knudsen B, Kohn AB, Nahir B, McFadden CS, Moroz LL (2006)
Complete DNA sequence of the mitochondrial genome of the sea-slug, Aplysia californica: conservation of the gene order in Euthyneura. Molecular Phylogenetics and evolution, 38(2):459-69 - Knudsen B, Miyamoto MM (2001)
A likelihood ratio test for evolutionary rate shifts and functional divergence among proteins. Proceedings of the National Academy of Sciences of the United States of America, 98(25):14512-7 - Knudsen B (2003)
Optimal Multiple Parsimony Alignment with Affine Gap Cost Using a Phylogenetic Tree. Lecture Notes in Bioinformatics, 2812:433-446
